CDS
| Accession Number | TCMCG006C105874 |
| gbkey | CDS |
| Protein Id | XP_013661077.1 |
| Location | complement(join(3034490..3034655,3034728..3034792,3034875..3034998,3035073..3035266,3037190..3037402,3037493..3037576,3037648..3037818,3037910..3037974,3038298..3038509,3038592..3038704,3038786..3038932,3039000..3039198,3039564..3039739)) |
| Gene | LOC106366067 |
| GeneID | 106366067 |
| Organism | Brassica napus |
Protein
| Length | 642aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA293435 |
| db_source | XM_013805623.2 |
| Definition | histone deacetylase 5-like isoform X3 [Brassica napus] |
EGGNOG-MAPPER Annotation
| COG_category | B |
| Description | histone deacetylase |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko01009 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] ko04131 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11407
[VIEW IN KEGG] |
| EC |
3.5.1.98
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko05034
[VIEW IN KEGG] ko05165 [VIEW IN KEGG] ko05203 [VIEW IN KEGG] map05034 [VIEW IN KEGG] map05165 [VIEW IN KEGG] map05203 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGAACATGCCCGAGAAACCTTCCGAATCCAATGGGAAAGTACATCGAAAGGTGGGTCTTGTTTACGACGAGACCATGTGCAAACACGACACACCTGACGGCGAGGCTCACCCTGAGCGTCCCGACCGTATCAGAGTCATCTGGGACAACCTTCAGCTCGCCGGAGTCACTCAAAGATGTGTGGTTCTTGGTGGTACCAAAGCAGAAGATGCGCATCTTCAACTGGTTCACACAAAGGACCATGTTAATCTAGTTAAGAGTAGCACAAACAAGAAAGATTATCAGAGTGACAGGGTTGCTTCACTGGTGAATTCGATATATCTTAATGGAAGTACATCTGAAGCTGCATATCTTGCAGCTGGTTCTGTTGTAGAGGTGGCTGAGAAAGTTGCCAAGGGAGAGTTAGACTCTGGATTTGCTATTGTCAGGCCTCCAGGGCACCATGCTGAGGCAGATGAAGCCATGGGGTTCTGTTTTTTCAACAATGTTGCAGTCGCTGCTAGTTATCTACTAGATGAAAGACCTGATCTAGGTGTCAAGAAGATTCTGGTTGTTGATTGGGATGTCCATCACGGAAACGGCACCCAGAAGATGTTCTGGGAAGATCCTCGTGTACTAGTTTTCTCTGTTCATAGGCATGAGGATGGAGGCTTCTATCCAGGGGGTGATGATGGATCATATAACATGGTTGGTGAAGGTCCAGGTGAAGGGTTCAACATAAACGTTCCATGGGAGCAAGGAAGATGTGGAGATGCGGATTATCTTGCTGCTTGGGACCATATCTTGATTCCTGTAGCTAAGGAGTTTAATCCTGATATTATCTTGTTATCAGCTGGCTTTGATGCAGCTATTGGTGATCCACTCGGTGGTTGTCGTGTTACACCATATGGATACTCAGTTATGTTGAAGAAGCTGATGGAGTTTGCACAAGGAAAGATTGTGATGGCATTAGAGGGAGGTTACAATCTTGACTCAATTGCAAAGTCTTCACTTGCTTGTGTCCAAGTTTTGCTTGAAGACAACCCAATTCAAGGTTCTTCTGAAGCAATTCCATTCATGTCCACATGGCGTGTCATACAAGCGGTACGCAAGAGACTATGTGCTTATTGGCCTTCACTTGCAGATGAACTACCATCGAAGCTGACTAATCAGAAAACTCCTACTCCAATTGTCCTTACCTCAAACTCCAACTCTGAAGCCAAAGACAACGCTCATGAACTCCTGGATCAAATGTCAAAACTCAACATTGAAAACCACCAAGGAGATACTAAGGTTTCTAGATCTTGGAGAAGTGATCTTTCAAAGGTTGACGTCTGGTATGCCTCTTTCGGATCCAACATGTGGAAACCAAGGTTCCTTTGCTATATTCAAGGGGGACAAGCGGCAGGAATGAAGAAGGCATGTGTTGGTGCAATGGATAAAACTCCACCAAAGGAAACAACGTGGGGAACGTTTCCAAACAGGCTATTCTTTGGCCGTGAATCTACAGTTACTTGGGGTGAAGGAGGATCTGCTTTCCTCAACCCTCTGACTAATCTCAGTGATCAAACTCACATGTGTTTCTACAGAATCACGCTTGAGCAGTTCAACGATGTTCTGTTTCAGGAAAATGGCATGAAAGTAGATTCTGATACTCCTCTCTTTGATCTAGCGGCTATGCAGTTAGTACAGAACAATGGATCCATTCCACTTGCTAAAGCTGGTTGGTATGGTAACGTTGTCTGTGTGGGAAAAGAATCCGACATACCTATACTTACAATGACTTGCACACTTTCTGTTCTTGAGAAGTTCACATCTGGTGAGGTCCCATTAAGACCTCCTGCAAAAGCCTATGCCAACACTTTGGTGATGGGACTTGTTGAAGGAGGAAGACTCTCTGAAGAAGAAGCTTGGGCTTACATAGACAATGCTGCTTCTAAACCTCTCTAA |
| Protein: MNMPEKPSESNGKVHRKVGLVYDETMCKHDTPDGEAHPERPDRIRVIWDNLQLAGVTQRCVVLGGTKAEDAHLQLVHTKDHVNLVKSSTNKKDYQSDRVASLVNSIYLNGSTSEAAYLAAGSVVEVAEKVAKGELDSGFAIVRPPGHHAEADEAMGFCFFNNVAVAASYLLDERPDLGVKKILVVDWDVHHGNGTQKMFWEDPRVLVFSVHRHEDGGFYPGGDDGSYNMVGEGPGEGFNINVPWEQGRCGDADYLAAWDHILIPVAKEFNPDIILLSAGFDAAIGDPLGGCRVTPYGYSVMLKKLMEFAQGKIVMALEGGYNLDSIAKSSLACVQVLLEDNPIQGSSEAIPFMSTWRVIQAVRKRLCAYWPSLADELPSKLTNQKTPTPIVLTSNSNSEAKDNAHELLDQMSKLNIENHQGDTKVSRSWRSDLSKVDVWYASFGSNMWKPRFLCYIQGGQAAGMKKACVGAMDKTPPKETTWGTFPNRLFFGRESTVTWGEGGSAFLNPLTNLSDQTHMCFYRITLEQFNDVLFQENGMKVDSDTPLFDLAAMQLVQNNGSIPLAKAGWYGNVVCVGKESDIPILTMTCTLSVLEKFTSGEVPLRPPAKAYANTLVMGLVEGGRLSEEEAWAYIDNAASKPL |